Publications by the researcher in collaboration with Stefan Schulz (39)

2024

  1. 'SNOMEDizing' Questionnaires for Standardizing Stroke Registry Data

    Studies in health technology and informatics, Vol. 316, pp. 1453-1457

2023

  1. SNOMED CT and Basic Formal Ontology - convergence or contradiction between standards? The case of 'clinical finding'

    Applied Ontology, Vol. 18, Núm. 3, pp. 207-237

2022

  1. The gene regulation knowledge commons: the action area of GREEKC

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1865, Núm. 1

2021

  1. Formalization of gene regulation knowledge using ontologies and gene ontology causal activity models

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1864, Núm. 11-12

2019

  1. Addressing the negation gap in SNOMED CT by reified negated concepts

    CEUR Workshop Proceedings

  2. An example of multimodal biological knowledge representation

    CEUR Workshop Proceedings

  3. Clinical text mining on FHIR

    Studies in Health Technology and Informatics

  4. Quantitative analysis of manual annotation of clinical text samples

    International Journal of Medical Informatics, Vol. 123, pp. 37-48

2018

  1. Analysis of MeSH indexing patterns and frequency of predicates

    Studies in Health Technology and Informatics

  2. Qualitative analysis of manual annotations of clinical text with SNOMED CT

    PLoS ONE, Vol. 13, Núm. 12

2017

  1. Basics of a drug ontology for annotations of clinical narratives

    CEUR Workshop Proceedings

  2. Building SNOMED CT Post-Coordinated Expressions from Annotation Groups

    Studies in Health Technology and Informatics, Vol. 235, pp. 446-450

  3. Experiments to create ontology-based disease models for diabetic retinopathy from different biomedical resources

    CEUR Workshop Proceedings

  4. HL7 FHIR: Ontological Reinterpretation of Medication Resources

    Studies in Health Technology and Informatics, Vol. 235, pp. 451-455

  5. Lexical ambiguity in SNOMED CT

    CEUR Workshop Proceedings

  6. MapReduce in the cloud: A use case study for efficient co-occurrence processing of MEDLINE annotations with MeSH

    Studies in Health Technology and Informatics

  7. Semantic technologies for re-use of clinical routine data

    Studies in Health Technology and Informatics

  8. The BioTop Family of Upper Level Ontological Resources for Biomedicine

    Studies in Health Technology and Informatics, Vol. 235, pp. 441-445

  9. Validating EHR clinical models using ontology patterns

    Journal of Biomedical Informatics, Vol. 76, pp. 124-137

2016

  1. Qualitative assessment of annotations using SNOMED CT

    CEUR Workshop Proceedings