Publications in collaboration with researchers from Norwegian University of Science and Technology (9)

2024

  1. Integration of chromosome locations and functional aspects of enhancers and topologically associating domains in knowledge graphs enables versatile queries about gene regulation

    Nucleic Acids Research, Vol. 52, Núm. 15, pp. e69

2022

  1. The gene regulation knowledge commons: the action area of GREEKC

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1865, Núm. 1

2021

  1. Formalization of gene regulation knowledge using ontologies and gene ontology causal activity models

    Biochimica et Biophysica Acta - Gene Regulatory Mechanisms, Vol. 1864, Núm. 11-12

2020

  1. BioHackathon 2015: Semantics of data for life sciences and reproducible research

    F1000Research, Vol. 9

2019

  1. An example of multimodal biological knowledge representation

    CEUR Workshop Proceedings

  2. BioHackathon series in 2013 and 2014: Improvements of semantic interoperability in life science data and services

    F1000Research, Vol. 8

2013

  1. OPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows

    Journal of Biomedical Semantics, Vol. 4, Núm. 1

2012

  1. OPPL-Galaxy: Enhancing ontology exploitation in Galaxy with OPPL

    ACM International Conference Proceeding Series

2010

  1. Technologies and best practices for building bio-ontologies

    Knowledge-Based Bioinformatics: From Analysis to Interpretation (wiley), pp. 67-86